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Slin_2228 protein (Spirosoma linguale) - STRING interaction network
"Slin_2228" - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Slin_2228D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (310 aa)    
Predicted Functional Partners:
Slin_2483
Histone deacetylase (300 aa)
     
  0.861
Slin_2227
DNA topoisomerase (904 aa)
   
 
  0.831
Slin_6268
Nitric oxide synthase NOS (1524 aa)
     
    0.809
Slin_5853
Uracil phosphoribosyltransferase (215 aa)
     
  0.728
Slin_2566
Chorismate mutase (357 aa)
   
   
  0.718
pheT
phenylalanyl-tRNA synthetase subunit beta (814 aa)
   
   
  0.685
Slin_1073
Class V aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (363 aa)
 
   
  0.666
gyrA
DNA gyrase subunit alpha; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (838 aa)
   
 
  0.648
Slin_3478
Class I and II aminotransferase (379 aa)
 
   
  0.626
Slin_4514
Aspartate kinase (818 aa)
   
 
  0.585
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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