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Slin_2239 protein (Spirosoma linguale) - STRING interaction network
"Slin_2239" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2239Hypothetical protein (333 aa)    
Predicted Functional Partners:
Slin_2238
Family 2 glycosyl transferase (374 aa)
 
          0.954
Slin_5852
Hypothetical protein (623 aa)
   
          0.776
Slin_5676
Hypothetical protein (107 aa)
   
          0.752
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (182 aa)
              0.750
Slin_3583
Hypothetical protein (313 aa)
   
          0.731
Slin_4080
Family 2 glycosyl transferase (401 aa)
   
          0.727
Slin_0248
O-methyltransferase-like protein (259 aa)
   
          0.721
Slin_2237
Polysaccharide deacetylase (215 aa)
 
          0.710
Slin_2380
Hypothetical protein (155 aa)
   
          0.702
Slin_3170
TonB-dependent receptor (827 aa)
   
          0.693
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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