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Slin_2243 protein (Spirosoma linguale) - STRING interaction network
"Slin_2243" - Intradiol ring-cleavage dioxygenase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2243Intradiol ring-cleavage dioxygenase (250 aa)    
Predicted Functional Partners:
Slin_1533
3-oxoacid CoA-transferase subunit B (447 aa)
   
   
  0.691
Slin_1535
3-oxoadipate enol-lactonase (373 aa)
   
   
  0.636
Slin_4021
Catechol 2,3-dioxygenase (319 aa)
 
     
  0.617
Slin_1548
Catechol 2,3-dioxygenase (330 aa)
 
     
  0.595
Slin_2244
Pirin (241 aa)
              0.526
Slin_2242
LytTR family transcriptional regulator (244 aa)
              0.521
Slin_2241
Signal transduction histidine kinase LytS (364 aa)
              0.521
Slin_0865
Hypothetical protein (151 aa)
   
          0.448
Slin_2145
Alpha/beta hydrolase fold protein (477 aa)
 
   
  0.424
Slin_5407
Nitrite reductase (NAD(P)H) small subunit (117 aa)
   
          0.410
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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