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Slin_2257 protein (Spirosoma linguale) - STRING interaction network
"Slin_2257" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2257Hypothetical protein (831 aa)    
Predicted Functional Partners:
Slin_2543
Hypothetical protein (607 aa)
   
          0.771
Slin_2001
Hypothetical protein (500 aa)
   
          0.770
Slin_6608
Transcriptional regulator (753 aa)
   
          0.725
Slin_5638
Hypothetical protein (223 aa)
   
          0.722
Slin_1217
Hypothetical protein (700 aa)
   
          0.712
Slin_0364
Hypothetical protein (683 aa)
   
          0.701
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.698
Slin_6613
Hypothetical protein (433 aa)
   
          0.697
Slin_5235
Hypothetical protein (425 aa)
   
          0.691
Slin_2569
Hypothetical protein (373 aa)
   
          0.665
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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