STRINGSTRING
Slin_2336 protein (Spirosoma linguale) - STRING interaction network
"Slin_2336" - DoxX family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2336DoxX family protein (144 aa)    
Predicted Functional Partners:
Slin_2337
Hypothetical protein (64 aa)
              0.734
Slin_6228
RagB/SusD domain-containing protein (511 aa)
   
          0.711
Slin_2338
Hypothetical protein (60 aa)
              0.679
Slin_6229
TonB-dependent receptor plug (1137 aa)
   
          0.662
Slin_1476
Hypothetical protein (421 aa)
   
          0.657
Slin_5267
PKD domain-containing protein (426 aa)
   
          0.655
Slin_0784
Hypothetical protein (466 aa)
   
          0.637
Slin_3265
Hypothetical protein (127 aa)
   
          0.595
Slin_1767
Hypothetical protein (411 aa)
   
          0.584
Slin_0743
Hypothetical protein (476 aa)
   
          0.560
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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