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Slin_2352 protein (Spirosoma linguale) - STRING interaction network
"Slin_2352" - RND family efflux transporter MFP subunit in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2352RND family efflux transporter MFP subunit (419 aa)    
Predicted Functional Partners:
Slin_2351
Hypothetical protein (495 aa)
 
          0.960
Slin_2349
Hypothetical protein (415 aa)
 
          0.880
Slin_2348
Hypothetical protein (384 aa)
 
          0.840
Slin_2346
PAS/PAC sensor signal transduction histidine kinase (426 aa)
 
          0.832
Slin_2350
ABC transporter (220 aa)
 
          0.820
Slin_4619
Hypothetical protein (817 aa)
 
          0.661
Slin_4616
Hypothetical protein (807 aa)
 
          0.646
Slin_0931
Hypothetical protein (804 aa)
   
          0.645
Slin_4628
Hypothetical protein (795 aa)
   
          0.635
Slin_0944
Hypothetical protein (803 aa)
   
          0.634
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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