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Slin_2361 protein (Spirosoma linguale) - STRING interaction network
"Slin_2361" - RND family efflux transporter MFP subunit in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2361RND family efflux transporter MFP subunit (372 aa)    
Predicted Functional Partners:
Slin_1020
Acriflavin resistance protein (1037 aa)
 
  0.977
Slin_2360
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter (1080 aa)
 
 
  0.967
Slin_2362
Outer membrane efflux protein (446 aa)
 
 
  0.938
Slin_1203
Outer membrane efflux protein (497 aa)
   
  0.936
Slin_6591
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter (1072 aa)
 
 
  0.927
Slin_0821
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter (1062 aa)
 
 
  0.927
Slin_2948
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter (1067 aa)
 
 
  0.925
Slin_0820
NodT family RND efflux system outer membrane lipoprotein (475 aa)
 
 
  0.919
Slin_5197
NodT family RND efflux system outer membrane lipoprotein (492 aa)
 
 
  0.913
Slin_6590
NodT family RND efflux system outer membrane lipoprotein (484 aa)
 
 
  0.911
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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