STRINGSTRING
Slin_2373 protein (Spirosoma linguale) - STRING interaction network
"Slin_2373" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2373Hypothetical protein (619 aa)    
Predicted Functional Partners:
Slin_2375
ECF subfamily RNA polymerase sigma-24 subunit (213 aa)
 
          0.769
Slin_2374
anti-FecI sigma factor FecR (351 aa)
 
          0.752
Slin_0526
Hypothetical protein (354 aa)
   
          0.697
Slin_6566
anti-FecI sigma factor FecR (362 aa)
   
          0.686
Slin_0440
RagB/SusD domain-containing protein (561 aa)
   
          0.675
Slin_0066
Hypothetical protein (371 aa)
   
          0.667
Slin_5238
Hypothetical protein (150 aa)
   
          0.660
Slin_3040
TonB-dependent receptor plug (1107 aa)
   
          0.656
Slin_3390
TonB-dependent receptor plug (1150 aa)
   
          0.654
Slin_3959
anti-FecI sigma factor FecR (376 aa)
   
          0.635
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]