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Slin_2379 protein (Spirosoma linguale) - STRING interaction network
"Slin_2379" - MerR family transcriptional regulator in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
Slin_2379MerR family transcriptional regulator (124 aa)    
Predicted Functional Partners:
Slin_5139
Glutamate--ammonia ligase (457 aa)
   
 
  0.740
Slin_2432
Glutamate--ammonia ligase (344 aa)
   
 
  0.740
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (890 aa)
              0.707
Slin_5708
Chaperone DnaJ domain-containing protein (301 aa)
   
 
  0.571
Slin_1937
DNA polymerase III subunit delta (344 aa)
   
          0.545
Slin_3917
PAS/PAC sensor signal transduction histidine kinase (683 aa)
   
 
  0.543
Slin_0386
PAS/PAC sensor signal transduction histidine kinase (674 aa)
   
 
  0.543
pheT
phenylalanyl-tRNA synthetase subunit beta (814 aa)
         
  0.537
grpE
GrpE protein HSP-70 cofactor; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of [...] (206 aa)
   
 
  0.495
Slin_5982
Histone family protein DNA-binding protein (100 aa)
     
 
  0.487
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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