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Slin_2383 protein (Spirosoma linguale) - STRING interaction network
"Slin_2383" - DNA protecting protein DprA in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2383DNA protecting protein DprA (370 aa)    
Predicted Functional Partners:
Slin_4052
Mg chelatase subunit ChlI (513 aa)
 
  0.888
Slin_5877
Hypothetical protein (117 aa)
 
        0.802
Slin_5516
Phosphoribosyltransferase (239 aa)
 
 
  0.796
Slin_1920
ComEC/Rec2-like protein (708 aa)
 
   
  0.790
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (894 aa)
            0.729
Slin_1971
DNA repair protein RadC (157 aa)
   
   
  0.657
Slin_0523
DNA repair protein RadC (231 aa)
   
   
  0.618
Slin_1614
Sua5/YciO/YrdC/YwlC family protein (206 aa)
 
   
  0.583
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (191 aa)
 
          0.574
rpsB
30S ribosomal protein S2 (277 aa)
 
     
  0.556
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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