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Slin_2384 protein (Spirosoma linguale) - STRING interaction network
"Slin_2384" - Glycoside hydrolase family protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2384Glycoside hydrolase family protein (330 aa)    
Predicted Functional Partners:
Slin_3081
alpha-N-arabinofuranosidase (347 aa)
          0.858
Slin_3393
alpha-N-arabinofuranosidase (350 aa)
          0.844
Slin_6191
Hypothetical protein (855 aa)
   
          0.768
Slin_6431
Glycoside hydrolase family protein (325 aa)
 
          0.731
Slin_2035
Hypothetical protein (678 aa)
 
          0.719
Slin_1420
Glycoside hydrolase family protein (530 aa)
 
          0.710
Slin_2765
RagB/SusD domain-containing protein (542 aa)
   
          0.546
Slin_2383
DNA protecting protein DprA (370 aa)
              0.542
Slin_1372
Glycerophosphoryl diester phosphodiesterase (252 aa)
   
          0.542
Slin_0438
Hypothetical protein (247 aa)
   
          0.490
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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