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Slin_2385 protein (Spirosoma linguale) - STRING interaction network
"Slin_2385" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2385Hypothetical protein (901 aa)    
Predicted Functional Partners:
Slin_0475
Hypothetical protein (195 aa)
   
          0.778
Slin_4915
Hypothetical protein (150 aa)
   
          0.777
Slin_4064
Hypothetical protein (180 aa)
   
          0.776
Slin_1298
Hypothetical protein (434 aa)
   
          0.776
Slin_6328
Hypothetical protein (150 aa)
   
          0.774
Slin_1528
Hypothetical protein (984 aa)
   
          0.772
Slin_2401
Metallophosphoesterase (260 aa)
   
          0.769
Slin_3301
Hypothetical protein (586 aa)
   
          0.761
Slin_6636
TonB-dependent receptor plug (992 aa)
   
          0.759
Slin_0989
Hypothetical protein (188 aa)
   
          0.756
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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