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Slin_2404 protein (Spirosoma linguale) - STRING interaction network
"Slin_2404" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2404Hypothetical protein (287 aa)    
Predicted Functional Partners:
Slin_3266
Hypothetical protein (983 aa)
   
          0.625
Slin_0971
Hypothetical protein (932 aa)
   
          0.595
Slin_4231
Lantibiotic dehydratase domain-containing protein (962 aa)
   
          0.576
Slin_3990
Peptidase M14 carboxypeptidase A (942 aa)
   
          0.575
Slin_1486
G-D-S-L family lipolytic protein (264 aa)
 
          0.573
Slin_3373
DinB family protein (181 aa)
   
          0.567
Slin_4026
Xylose isomerase (311 aa)
   
          0.533
Slin_2403
Hypothetical protein (256 aa)
              0.514
Slin_1416
Glycoside hydrolase family protein (557 aa)
   
          0.510
Slin_3934
Glycoside hydrolase family protein (576 aa)
   
          0.509
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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