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Slin_2414 protein (Spirosoma linguale) - STRING interaction network
"Slin_2414" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2414Hypothetical protein (377 aa)    
Predicted Functional Partners:
Slin_2413
RagB/SusD domain-containing protein (480 aa)
 
          0.777
Slin_5627
Anthranilate phosphoribosyltransferase-like protein (419 aa)
   
          0.691
Slin_2412
TonB-dependent receptor (1029 aa)
              0.683
Slin_5004
Hypothetical protein (1010 aa)
   
          0.639
Slin_4946
Hypothetical protein (711 aa)
   
          0.597
Slin_5932
Hypothetical protein (1182 aa)
   
          0.583
Slin_1130
PDZ/DHR/GLGF domain-containing protein (789 aa)
   
          0.575
Slin_4309
Hypothetical protein (416 aa)
   
          0.549
Slin_5403
Hypothetical protein (519 aa)
   
          0.548
Slin_4549
Hypothetical protein (181 aa)
   
          0.539
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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