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Slin_2424 protein (Spirosoma linguale) - STRING interaction network
"Slin_2424" - Beta-lactamase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2424Beta-lactamase (322 aa)    
Predicted Functional Partners:
Slin_5941
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (526 aa)
   
 
  0.957
Slin_1066
Radical SAM domain-containing protein (387 aa)
   
          0.736
Slin_2339
Radical SAM domain-containing protein (350 aa)
   
          0.685
Slin_4151
Hypothetical protein (182 aa)
   
          0.633
Slin_2425
Peptidase T; Cleaves the N-terminal amino acid of tripeptides (420 aa)
              0.632
Slin_5296
Catalase (287 aa)
 
          0.613
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (190 aa)
     
      0.604
Slin_2563
Sugar isomerase (185 aa)
     
      0.604
Slin_2272
Hypothetical protein (186 aa)
   
          0.601
Slin_3667
Major royal jelly protein (343 aa)
 
        0.591
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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