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Slin_2437 protein (Spirosoma linguale) - STRING interaction network
"Slin_2437" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2437Hypothetical protein (178 aa)    
Predicted Functional Partners:
Slin_1902
Hypothetical protein (797 aa)
   
          0.722
Slin_4939
Hypothetical protein (360 aa)
   
          0.700
Slin_5308
Hypothetical protein (326 aa)
   
          0.689
Slin_2438
Class V aminotransferase (398 aa)
 
          0.689
Slin_4386
Hypothetical protein (156 aa)
   
          0.646
Slin_1571
TonB-dependent receptor (804 aa)
   
          0.633
Slin_6271
Heme NO binding domain-containing protein (179 aa)
   
          0.631
Slin_1187
Hypothetical protein (228 aa)
   
          0.606
Slin_4427
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (420 aa)
 
          0.605
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.605
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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