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Slin_2451 protein (Spirosoma linguale) - STRING interaction network
"Slin_2451" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2451Hypothetical protein (257 aa)    
Predicted Functional Partners:
Slin_3994
TetR family transcriptional regulator (238 aa)
   
          0.726
Slin_1424
RagB/SusD domain-containing protein (604 aa)
   
          0.630
Slin_2450
PQQ-dependent enzyme-like protein (718 aa)
 
          0.623
Slin_2426
Hypothetical protein (165 aa)
   
          0.623
Slin_2828
Hypothetical protein (364 aa)
   
          0.613
Slin_2626
RagB/SusD domain-containing protein (507 aa)
   
          0.607
Slin_2915
Hypothetical protein (345 aa)
   
          0.576
Slin_2872
TonB-dependent receptor (934 aa)
   
          0.555
Slin_5190
Cytochrome b5 (82 aa)
   
          0.551
Slin_0767
Hypothetical protein (218 aa)
   
          0.539
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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