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Slin_2462 protein (Spirosoma linguale) - STRING interaction network
"Slin_2462" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2462Family 2 glycosyl transferase (421 aa)    
Predicted Functional Partners:
Slin_2461
Family 2 glycosyl transferase (289 aa)
 
          0.916
Slin_2463
ABC transporter (431 aa)
 
          0.885
Slin_2464
ABC transporter (286 aa)
 
          0.864
Slin_2465
Family 2 glycosyl transferase (350 aa)
 
          0.823
Slin_1131
NAD-dependent epimerase/dehydratase (315 aa)
   
          0.681
Slin_4364
Family 2 glycosyl transferase (294 aa)
   
          0.672
Slin_0721
Family 2 glycosyl transferase (297 aa)
   
          0.664
Slin_2458
Family 2 glycosyl transferase (340 aa)
   
          0.514
Slin_6302
Family 2 glycosyl transferase (312 aa)
   
          0.455
Slin_4349
Glycoside hydrolase family protein (1236 aa)
   
          0.427
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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