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Slin_2465 protein (Spirosoma linguale) - STRING interaction network
"Slin_2465" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2465Family 2 glycosyl transferase (350 aa)    
Predicted Functional Partners:
Slin_2462
Family 2 glycosyl transferase (421 aa)
 
          0.823
Slin_4932
Family 2 glycosyl transferase (274 aa)
          0.805
Slin_5383
Family 2 glycosyl transferase (304 aa)
 
     
  0.801
Slin_2463
ABC transporter (431 aa)
 
     
  0.795
Slin_2464
ABC transporter (286 aa)
 
   
  0.790
Slin_5207
Family 2 glycosyl transferase (254 aa)
 
          0.775
Slin_4814
Family 2 glycosyl transferase (308 aa)
   
          0.775
Slin_1670
Family 2 glycosyl transferase (219 aa)
   
          0.772
Slin_6302
Family 2 glycosyl transferase (312 aa)
   
          0.769
Slin_4093
Family 2 glycosyl transferase (296 aa)
 
          0.766
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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