STRINGSTRING
Slin_2469 protein (Spirosoma linguale) - STRING interaction network
"Slin_2469" - Glycoside hydrolase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2469Glycoside hydrolase (641 aa)    
Predicted Functional Partners:
Slin_1422
Hypothetical protein (760 aa)
 
          0.675
Slin_1718
Hypothetical protein (903 aa)
 
          0.574
Slin_2883
Alpha amylase (630 aa)
 
          0.509
Slin_5737
Peptidase S46 (711 aa)
   
          0.508
Slin_2468
AraC family transcriptional regulator (304 aa)
              0.487
Slin_2107
AraC family transcriptional regulator (1349 aa)
   
          0.482
Slin_6195
Hypothetical protein (478 aa)
   
          0.465
Slin_1719
Glycoside hydrolase family protein (922 aa)
 
          0.462
Slin_0624
Beta-galactosidase (894 aa)
 
          0.457
Slin_6081
Glycoside hydrolase family protein (480 aa)
   
          0.444
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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