STRINGSTRING
Slin_2470 protein (Spirosoma linguale) - STRING interaction network
"Slin_2470" - Gluconate transporter in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2470Gluconate transporter (438 aa)    
Predicted Functional Partners:
Slin_2471
5-methylcytosine restriction system component-like protein (428 aa)
              0.819
Slin_2472
ASPIC/UnbV domain-containing protein (1172 aa)
              0.764
Slin_0411
Carbohydrate kinase (495 aa)
 
     
  0.634
Slin_2473
RagB/SusD domain-containing protein (615 aa)
              0.524
Slin_1232
Endoribonuclease L-PSP (158 aa)
 
          0.523
Slin_2474
TonB-dependent receptor plug (1095 aa)
              0.493
Slin_4083
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (484 aa)
         
  0.466
Slin_4247
Carbohydrate kinase (492 aa)
         
  0.457
Slin_1805
Sugar (pentulose and hexulose) kinase-like protein (474 aa)
         
  0.457
ilvD
Dihydroxy-acid dehydratase (569 aa)
   
   
  0.432
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (7%) [HD]