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Slin_2478 protein (Spirosoma linguale) - STRING interaction network
"Slin_2478" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2478Hypothetical protein (473 aa)    
Predicted Functional Partners:
Slin_4495
Hypothetical protein (489 aa)
   
          0.718
Slin_1871
Hypothetical protein (794 aa)
   
          0.693
Slin_5230
PKD domain-containing protein (1222 aa)
   
          0.688
Slin_5948
Hypothetical protein (204 aa)
   
          0.661
Slin_3257
Hypothetical protein (185 aa)
   
          0.660
Slin_6388
Hypothetical protein (73 aa)
   
          0.648
Slin_4223
Hypothetical protein (542 aa)
   
          0.630
Slin_3419
RagB/SusD domain-containing protein (521 aa)
   
          0.628
Slin_1161
Hypothetical protein (831 aa)
   
          0.625
Slin_1687
Hypothetical protein (751 aa)
   
          0.616
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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