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Slin_2479 protein (Spirosoma linguale) - STRING interaction network
"Slin_2479" - Nitrogen-fixing NifU domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2479Nitrogen-fixing NifU domain-containing protein (200 aa)    
Predicted Functional Partners:
Slin_4680
Cysteine desulfurase (372 aa)
   
 
  0.715
Slin_4051
Cysteine desulfurase (380 aa)
   
 
  0.715
Slin_1497
Cysteine desulfurase (389 aa)
   
 
  0.715
Slin_5822
Iron-sulfur cluster assembly accessory protein (108 aa)
   
 
  0.651
rpmA
50S ribosomal protein L27 (100 aa)
   
        0.554
Slin_2478
Hypothetical protein (473 aa)
              0.522
Slin_5080
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein (170 aa)
   
      0.483
Slin_4250
Methionine synthase (1261 aa)
         
  0.468
Slin_5516
Phosphoribosyltransferase (239 aa)
   
        0.462
Slin_3269
Ferredoxin (107 aa)
 
          0.445
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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