STRINGSTRING
Slin_2496 protein (Spirosoma linguale) - STRING interaction network
"Slin_2496" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2496Hypothetical protein (371 aa)    
Predicted Functional Partners:
Slin_2497
Hypothetical protein (245 aa)
          0.969
Slin_2495
Hypothetical protein (204 aa)
              0.864
Slin_2509
Hypothetical protein (163 aa)
 
          0.860
Slin_2494
Alpha/beta hydrolase fold protein (297 aa)
 
          0.754
Slin_2514
Hypothetical protein (142 aa)
 
          0.753
Slin_2513
Hypothetical protein (158 aa)
 
          0.664
Slin_2498
Hypothetical protein (36 aa)
              0.656
Slin_2511
YHS domain-containing protein (150 aa)
 
          0.571
Slin_3075
Alpha/beta hydrolase (328 aa)
   
          0.546
Slin_1845
Hypothetical protein (98 aa)
   
          0.532
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (11%) [HD]