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Slin_2501 protein (Spirosoma linguale) - STRING interaction network
"Slin_2501" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2501Hypothetical protein (329 aa)    
Predicted Functional Partners:
Slin_0602
Hypothetical protein (453 aa)
   
          0.722
Slin_1223
G-D-S-L family lipolytic protein (316 aa)
   
          0.709
Slin_2500
Hypothetical protein (631 aa)
              0.638
Slin_1171
Glucose/sorbosone dehydrogenase (491 aa)
   
          0.600
Slin_1172
Blue (type 1) copper domain-containing protein (358 aa)
   
          0.554
Slin_2499
XRE family transcriptional regulator (101 aa)
              0.497
Slin_1280
Penicillin-binding protein transpeptidase (1323 aa)
   
          0.480
Slin_2455
Heparinase II/III family protein (628 aa)
   
          0.469
Slin_2465
Family 2 glycosyl transferase (350 aa)
   
          0.432
Slin_2781
Hypothetical protein (112 aa)
   
          0.422
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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