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Slin_2510 protein (Spirosoma linguale) - STRING interaction network
"Slin_2510" - Electron transfer DM13 in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2510Electron transfer DM13 (162 aa)    
Predicted Functional Partners:
Slin_2509
Hypothetical protein (163 aa)
              0.840
Slin_2511
YHS domain-containing protein (150 aa)
              0.721
Slin_4534
TonB-dependent receptor (779 aa)
   
          0.491
Slin_2259
Hypothetical protein (299 aa)
   
          0.486
Slin_1546
XisI protein (115 aa)
   
          0.480
Slin_6446
Hypothetical protein (270 aa)
   
          0.460
Slin_0238
XisH protein (138 aa)
   
          0.453
Slin_1545
XisH protein (138 aa)
   
          0.447
Slin_1752
Hypothetical protein (152 aa)
   
          0.435
Slin_5342
Hypothetical protein (426 aa)
   
          0.425
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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