STRINGSTRING
Slin_2520 protein (Spirosoma linguale) - STRING interaction network
"Slin_2520" - Short-chain dehydrogenase/reductase SDR in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2520Short-chain dehydrogenase/reductase SDR (271 aa)    
Predicted Functional Partners:
Slin_2519
Gluconolactonase (545 aa)
 
 
  0.961
Slin_3203
Gluconolactonase (342 aa)
 
 
  0.921
Slin_0076
SMP-30/gluconolaconase/LRE domain-containing protein (307 aa)
 
 
  0.919
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (426 aa)
   
  0.840
Slin_4168
Glyceraldehyde-3-phosphate dehydrogenase (333 aa)
   
  0.840
Slin_1998
Glyceraldehyde-3-phosphate dehydrogenase (330 aa)
   
  0.840
pdhA
Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (352 aa)
   
  0.833
Slin_2908
Phosphoglycerate mutase (219 aa)
   
    0.830
Slin_5165
Transketolase (326 aa)
   
  0.829
Slin_4063
Pyruvate kinase (488 aa)
       
  0.820
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (9%) [HD]