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Slin_2522 protein (Spirosoma linguale) - STRING interaction network
"Slin_2522" - Glycogen debranching protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2522Glycogen debranching protein (652 aa)    
Predicted Functional Partners:
Slin_3551
Alpha-glucan phosphorylase (567 aa)
   
 
  0.999
Slin_6209
Malto-oligosyltrehalose trehalohydrolase (621 aa)
   
   
  0.920
Slin_5281
Malto-oligosyltrehalose trehalohydrolase (642 aa)
   
   
  0.920
Slin_3113
Malto-oligosyltrehalose trehalohydrolase (640 aa)
   
   
  0.920
glgB
1,4-alpha-glucan branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position (646 aa)
   
   
  0.920
Slin_0361
Alpha amylase (958 aa)
   
   
  0.920
Slin_2523
Major intrinsic protein (279 aa)
   
        0.834
Slin_2521
Hypothetical protein (885 aa)
 
          0.770
Slin_0060
Pyridoxal-dependent decarboxylase (465 aa)
     
        0.757
Slin_2527
Hypothetical protein (286 aa)
              0.749
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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