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Slin_2534 protein (Spirosoma linguale) - STRING interaction network
"Slin_2534" - 3-demethylubiquinone-9 3-methyltransferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_25343-demethylubiquinone-9 3-methyltransferase (241 aa)    
Predicted Functional Partners:
Slin_2532
Chalcone and stilbene synthase domain-containing protein (404 aa)
          0.954
Slin_2533
UbiA prenyltransferase (285 aa)
              0.880
Slin_3185
Monooxygenase FAD-binding protein (375 aa)
 
          0.833
Slin_3187
Chalcone and stilbene synthase domain-containing protein (350 aa)
          0.760
Slin_2531
Hypothetical protein (186 aa)
              0.646
Slin_2530
Hypothetical protein (274 aa)
              0.640
Slin_2149
Monooxygenase FAD-binding protein (391 aa)
   
 
  0.629
Slin_2116
Monooxygenase FAD-binding protein (384 aa)
   
 
  0.629
Slin_1542
Monooxygenase FAD-binding protein (374 aa)
   
 
  0.629
Slin_1534
4-hydroxybenzoate 3-monooxygenase (405 aa)
   
 
  0.629
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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