STRINGSTRING
Slin_2536 protein (Spirosoma linguale) - STRING interaction network
"Slin_2536" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2536Hypothetical protein (741 aa)    
Predicted Functional Partners:
Slin_2915
Hypothetical protein (345 aa)
   
          0.762
Slin_2828
Hypothetical protein (364 aa)
   
          0.761
Slin_0014
Amidohydrolase 2 (374 aa)
   
          0.725
Slin_3437
Major facilitator superfamily protein (416 aa)
   
          0.708
Slin_2535
Peptidase M14 carboxypeptidase A (860 aa)
 
          0.700
Slin_2472
ASPIC/UnbV domain-containing protein (1172 aa)
   
          0.696
Slin_3038
Hypothetical protein (524 aa)
   
          0.691
Slin_3236
TonB-dependent receptor (808 aa)
 
          0.689
Slin_5308
Hypothetical protein (326 aa)
   
          0.664
Slin_5796
Hypothetical protein (521 aa)
   
          0.642
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (18%) [HD]