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Slin_2557 protein (Spirosoma linguale) - STRING interaction network
"Slin_2557" - RND family efflux transporter MFP subunit in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2557RND family efflux transporter MFP subunit (356 aa)    
Predicted Functional Partners:
Slin_2558
Acriflavin resistance protein (1035 aa)
 
   
  0.975
Slin_4653
Hypothetical protein (413 aa)
 
 
  0.911
Slin_0794
Hypothetical protein (412 aa)
 
 
  0.897
Slin_2559
Outer membrane efflux protein (445 aa)
 
          0.890
Slin_2349
Hypothetical protein (415 aa)
 
 
  0.874
Slin_5020
Hypothetical protein (418 aa)
   
 
  0.804
Slin_3717
Acriflavin resistance protein (1055 aa)
 
   
  0.782
Slin_1020
Acriflavin resistance protein (1037 aa)
 
   
  0.765
Slin_2817
Acriflavin resistance protein (1053 aa)
 
   
  0.764
Slin_5504
Acriflavin resistance protein (1146 aa)
 
   
  0.761
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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