STRINGSTRING
Slin_2558 protein (Spirosoma linguale) - STRING interaction network
"Slin_2558" - Acriflavin resistance protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2558Acriflavin resistance protein (1035 aa)    
Predicted Functional Partners:
Slin_2557
RND family efflux transporter MFP subunit (356 aa)
 
   
  0.975
Slin_2559
Outer membrane efflux protein (445 aa)
              0.859
Slin_2361
RND family efflux transporter MFP subunit (372 aa)
 
 
  0.854
Slin_6592
RND family efflux transporter MFP subunit (378 aa)
 
 
  0.810
Slin_6009
RND family efflux transporter MFP subunit (356 aa)
 
   
  0.778
Slin_0822
RND family efflux transporter MFP subunit (390 aa)
 
 
  0.774
Slin_2818
RND family efflux transporter MFP subunit (349 aa)
 
   
  0.747
Slin_2947
RND family efflux transporter MFP subunit (363 aa)
 
 
  0.737
Slin_2615
RND family efflux transporter MFP subunit (380 aa)
 
   
  0.734
Slin_5505
RND family efflux transporter MFP subunit (375 aa)
 
   
  0.722
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (6%) [HD]