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Slin_2563 protein (Spirosoma linguale) - STRING interaction network
"Slin_2563" - Sugar isomerase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2563Sugar isomerase (185 aa)    
Predicted Functional Partners:
Slin_3466
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (159 aa)
 
 
  0.899
Slin_5528
HAD-superfamily hydrolase (172 aa)
   
  0.893
Slin_3107
Histidinol-phosphate phosphatase (199 aa)
   
  0.882
Slin_6505
PfkB domain-containing protein (333 aa)
 
 
 
  0.873
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (190 aa)
 
   
 
0.843
Slin_3111
Glycosyl transferase family protein (356 aa)
 
     
  0.781
Slin_6413
Glycosyl transferase family protein (329 aa)
 
     
  0.780
Slin_3108
Glycosyl transferase family protein (358 aa)
 
     
  0.773
Slin_6380
PfkB domain-containing protein (337 aa)
 
          0.735
Slin_2562
ROK family protein (314 aa)
              0.723
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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