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Slin_2567 protein (Spirosoma linguale) - STRING interaction network
"Slin_2567" - DNA topoisomerase type IIA B domain-containing protein in Spirosoma linguale
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2567DNA topoisomerase type IIA B domain-containing protein (632 aa)    
Predicted Functional Partners:
Slin_2227
DNA topoisomerase (904 aa)
 
  0.999
gyrA
DNA gyrase subunit alpha; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (838 aa)
  0.999
Slin_4880
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)
  0.985
Slin_3231
DNA topoisomerase (365 aa)
     
 
  0.867
Slin_0543
DNA polymerase I (1024 aa)
 
 
  0.749
Slin_5625
SNF2-like protein (1185 aa)
 
    0.732
Slin_6180
SNF2-like protein (1003 aa)
 
    0.711
Slin_3350
SNF2-like protein (1127 aa)
 
    0.711
argS
arginyl-tRNA synthetase (599 aa)
   
   
  0.692
Slin_5630
seryl-tRNA synthetase (423 aa)
 
   
  0.690
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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