STRINGSTRING
Slin_2592 protein (Spirosoma linguale) - STRING interaction network
"Slin_2592" - Family 2 glycosyl transferase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2592Family 2 glycosyl transferase (256 aa)    
Predicted Functional Partners:
Slin_2591
Colanic acid biosynthesis acetyltransferase WcaF (212 aa)
   
   
  0.895
Slin_2590
Family 2 glycosyl transferase (310 aa)
              0.880
Slin_1670
Family 2 glycosyl transferase (219 aa)
 
          0.839
Slin_2011
Family 2 glycosyl transferase (335 aa)
 
 
  0.797
Slin_4814
Family 2 glycosyl transferase (308 aa)
 
          0.793
Slin_5180
Family 2 glycosyl transferase (322 aa)
 
     
  0.783
Slin_6302
Family 2 glycosyl transferase (312 aa)
 
          0.767
Slin_2458
Family 2 glycosyl transferase (340 aa)
 
          0.767
Slin_2593
Glycosyl transferase family protein (405 aa)
   
   
  0.752
fcl
NAD-dependent epimerase/dehydratase; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (313 aa)
 
   
  0.746
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]