STRINGSTRING
Slin_2603 protein (Spirosoma linguale) - STRING interaction network
"Slin_2603" - Response regulator receiver protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2603Response regulator receiver protein (141 aa)    
Predicted Functional Partners:
Slin_3191
Acyl carrier protein (86 aa)
   
          0.594
Slin_5725
Hypothetical protein (198 aa)
   
          0.589
Slin_1217
Hypothetical protein (700 aa)
   
          0.583
Slin_2257
Hypothetical protein (831 aa)
   
          0.563
Slin_0221
Hypothetical protein (484 aa)
   
          0.562
Slin_5521
Hypothetical protein (607 aa)
   
          0.516
Slin_1374
Hypothetical protein (705 aa)
   
          0.514
Slin_5096
Hypothetical protein (989 aa)
   
          0.501
Slin_4180
Hypothetical protein (990 aa)
   
          0.486
Slin_3008
Hypothetical protein (419 aa)
   
          0.480
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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