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Slin_2606 protein (Spirosoma linguale) - STRING interaction network
"Slin_2606" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2606Hypothetical protein (132 aa)    
Predicted Functional Partners:
Slin_2518
Hypothetical protein (158 aa)
   
          0.776
Slin_2607
MarR family transcriptional regulator (158 aa)
              0.602
Slin_2605
Hypothetical protein (113 aa)
              0.587
Slin_4021
Catechol 2,3-dioxygenase (319 aa)
 
          0.510
Slin_1099
ATP/cobalamin adenosyltransferase (192 aa)
 
   
  0.469
Slin_5523
Delta-1-pyrroline-5-carboxylate dehydrogenase (543 aa)
   
   
  0.444
Slin_4408
Aldehyde dehydrogenase (457 aa)
   
   
  0.444
Slin_3069
Aldehyde dehydrogenase (508 aa)
   
   
  0.444
Slin_2333
Aldehyde dehydrogenase (504 aa)
   
   
  0.444
Slin_1742
Aldehyde dehydrogenase (476 aa)
   
   
  0.444
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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