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Slin_2610 protein (Spirosoma linguale) - STRING interaction network
"Slin_2610" - X-Pro dipeptidyl-peptidase domain-containing protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2610X-Pro dipeptidyl-peptidase domain-containing protein (629 aa)    
Predicted Functional Partners:
Slin_2611
GntR family transcriptional regulator (479 aa)
              0.767
Slin_2609
Type 11 methyltransferase (259 aa)
              0.630
Slin_1987
RpoD subfamily RNA polymerase sigma-70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
       
      0.624
Slin_2608
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (309 aa)
              0.621
Slin_1703
Lipoprotein (442 aa)
   
          0.584
Slin_1702
TonB-dependent receptor plug (1016 aa)
   
          0.575
Slin_2612
Class V aminotransferase (399 aa)
              0.502
Slin_3004
Type I phosphodiesterase/nucleotide pyrophosphatase (562 aa)
 
          0.497
Slin_0742
LmbE family protein (882 aa)
   
          0.494
Slin_5609
PDZ/DHR/GLGF domain-containing protein (421 aa)
   
          0.434
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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