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Slin_2611 protein (Spirosoma linguale) - STRING interaction network
"Slin_2611" - GntR family transcriptional regulator in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2611GntR family transcriptional regulator (479 aa)    
Predicted Functional Partners:
Slin_2610
X-Pro dipeptidyl-peptidase domain-containing protein (629 aa)
              0.767
Slin_2608
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid (309 aa)
   
        0.605
Slin_2123
Hypothetical protein (1073 aa)
   
      0.569
Slin_2609
Type 11 methyltransferase (259 aa)
              0.568
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (244 aa)
   
      0.564
Slin_2612
Class V aminotransferase (399 aa)
   
        0.561
Slin_3931
Hypothetical protein (459 aa)
       
      0.469
Slin_4293
Hypothetical protein (330 aa)
     
      0.464
Slin_4111
Rhs family protein-like protein (989 aa)
     
      0.464
Slin_2614
Hypothetical protein (117 aa)
              0.460
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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