STRINGSTRING
Slin_2629 protein (Spirosoma linguale) - STRING interaction network
"Slin_2629" - Glycosyl hydrolase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2629Glycosyl hydrolase (397 aa)    
Predicted Functional Partners:
Slin_5003
Sulfatase (533 aa)
     
  0.911
Slin_3375
Sulfatase (571 aa)
     
  0.911
Slin_6289
Sulfatase (486 aa)
       
  0.911
Slin_1907
Glycoside hydrolase family protein (730 aa)
         
    0.900
Slin_2630
N-acylglucosamine 2-epimerase (417 aa)
 
          0.896
Slin_2628
GntR family transcriptional regulator (234 aa)
              0.862
Slin_3251
Peptidase S10 serine carboxypeptidase (514 aa)
       
    0.858
Slin_2631
Beta-galactosidase (701 aa)
     
    0.854
Slin_2625
Dihydrodipicolinate synthetase (315 aa)
 
     
  0.845
Slin_2624
Kelch repeat-containing protein (372 aa)
 
     
  0.767
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
Server load: low (10%) [HD]