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Slin_2644 protein (Spirosoma linguale) - STRING interaction network
"Slin_2644" - Alcohol dehydrogenase zinc-binding domain-containing protein in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2644Alcohol dehydrogenase zinc-binding domain-containing protein (329 aa)    
Predicted Functional Partners:
Slin_2643
AraC family transcriptional regulator (305 aa)
              0.859
Slin_2645
Hypothetical protein (276 aa)
              0.634
Slin_2646
ROK family protein (298 aa)
              0.621
Slin_5560
Alcohol dehydrogenase zinc-binding domain-containing protein (341 aa)
       
0.575
Slin_3645
Short-chain dehydrogenase/reductase SDR (268 aa)
 
   
  0.522
Slin_2647
Sugar permease (331 aa)
              0.515
Slin_0317
Binding-protein-dependent transporters inner membrane component (519 aa)
              0.515
Slin_3927
Short-chain dehydrogenase/reductase SDR (272 aa)
 
   
  0.507
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
              0.502
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (254 aa)
   
   
  0.474
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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