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Slin_2648 protein (Spirosoma linguale) - STRING interaction network
"Slin_2648" - ADP-ribosylation/crystallin J1 in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2648ADP-ribosylation/crystallin J1 (543 aa)    
Predicted Functional Partners:
Slin_2647
Sugar permease (331 aa)
 
          0.959
Slin_2649
Ribokinase (319 aa)
 
          0.922
Slin_2645
Hypothetical protein (276 aa)
 
          0.775
Slin_0379
Sugar permease (330 aa)
 
          0.751
Slin_0152
Sugar permease (335 aa)
   
          0.747
Slin_4320
Glycoside hydrolase family protein (330 aa)
   
          0.729
Slin_6449
Hypothetical protein (857 aa)
   
          0.723
Slin_0088
Xylose isomerase (341 aa)
   
          0.708
Slin_2646
ROK family protein (298 aa)
              0.681
Slin_0438
Hypothetical protein (247 aa)
   
          0.664
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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