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Slin_2649 protein (Spirosoma linguale) - STRING interaction network
"Slin_2649" - Ribokinase in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2649Ribokinase (319 aa)    
Predicted Functional Partners:
Slin_2647
Sugar permease (331 aa)
 
          0.949
Slin_4419
Deoxyribose-phosphate aldolase/phospho-2-dehydro- 3-deoxyheptonate aldolase (217 aa)
   
 
  0.941
Slin_2923
Ribose-phosphate pyrophosphokinase (313 aa)
     
  0.939
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
 
          0.922
Slin_2594
Transketolase (681 aa)
   
 
  0.916
Slin_2701
RpiB/LacA/LacB family sugar-phosphate isomerase (143 aa)
   
 
  0.907
Slin_2990
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (585 aa)
   
 
  0.906
Slin_0976
Transketolase (285 aa)
   
 
    0.901
Slin_0975
Transketolase (317 aa)
       
    0.900
Slin_1048
Inner-membrane translocator (328 aa)
 
   
  0.876
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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