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Slin_2650 protein (Spirosoma linguale) - STRING interaction network
"Slin_2650" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2650Hypothetical protein (280 aa)    
Predicted Functional Partners:
Slin_5811
Dehydrogenase (1040 aa)
            0.814
Slin_0966
Hypothetical protein (259 aa)
 
            0.727
Slin_2651
Xylose isomerase (268 aa)
              0.657
Slin_2652
Xylose isomerase (283 aa)
              0.651
Slin_2649
Ribokinase (319 aa)
              0.553
Slin_2648
ADP-ribosylation/crystallin J1 (543 aa)
              0.504
Slin_2647
Sugar permease (331 aa)
              0.492
Slin_2646
ROK family protein (298 aa)
              0.414
Slin_2645
Hypothetical protein (276 aa)
              0.407
Slin_5487
Dehydrogenase (1023 aa)
            0.402
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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