STRINGSTRING
Slin_2651 protein (Spirosoma linguale) - STRING interaction network
"Slin_2651" - Xylose isomerase in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2651Xylose isomerase (268 aa)    
Predicted Functional Partners:
Slin_2652
Xylose isomerase (283 aa)
              0.850
Slin_4084
Hypothetical protein (917 aa)
 
          0.787
Slin_5453
Hypothetical protein (924 aa)
 
          0.786
Slin_5931
Ribonuclease inhibitor (507 aa)
 
          0.767
Slin_0961
Hypothetical protein (729 aa)
   
          0.760
Slin_0959
Hypothetical protein (776 aa)
 
          0.747
Slin_5451
Hypothetical protein (500 aa)
 
          0.696
Slin_4085
Hypothetical protein (491 aa)
 
          0.696
Slin_0957
Hypothetical protein (785 aa)
   
          0.692
Slin_5007
Hypothetical protein (568 aa)
   
          0.662
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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