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Slin_2685 protein (Spirosoma linguale) - STRING interaction network
"Slin_2685" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2685Hypothetical protein (354 aa)    
Predicted Functional Partners:
Slin_2684
Rhodanese (101 aa)
              0.593
Slin_1378
Phospholipase C, phosphocholine-specific (838 aa)
   
          0.546
Slin_2076
Hypothetical protein (1074 aa)
   
          0.507
Slin_2934
TonB-dependent receptor (987 aa)
   
          0.491
Slin_5287
TonB-dependent receptor (933 aa)
   
          0.480
Slin_4942
Aminopeptidase (689 aa)
   
          0.462
Slin_0311
Hypothetical protein (108 aa)
   
          0.440
Slin_5362
Hypothetical protein (213 aa)
   
          0.429
Slin_5403
Hypothetical protein (519 aa)
   
          0.421
Slin_6435
Hypothetical protein (280 aa)
   
          0.415
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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