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Slin_2688 protein (Spirosoma linguale) - STRING interaction network
"Slin_2688" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2688Hypothetical protein (415 aa)    
Predicted Functional Partners:
Slin_2687
Glycoside hydrolase (677 aa)
              0.632
Slin_5792
Peptidase M16 domain-containing protein (458 aa)
   
        0.627
Slin_1771
Amidohydrolase (1020 aa)
   
          0.619
Slin_4770
Phosphoglycerate mutase (168 aa)
   
          0.613
Slin_1772
Amidohydrolase (433 aa)
   
          0.544
Slin_0013
Muconate lactonizing mandelate racemase protein (366 aa)
 
          0.525
Slin_1934
Muconate lactonizing mandelate racemase protein (355 aa)
 
          0.507
Slin_0515
Hypothetical protein (183 aa)
   
          0.495
Slin_6349
Muconate lactonizing mandelate racemase protein (340 aa)
 
          0.494
Slin_6064
Curlin associated repeat-containing protein (453 aa)
   
          0.486
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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