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Slin_2705 protein (Spirosoma linguale) - STRING interaction network
"Slin_2705" - Exonuclease RNase T and DNA polymerase III in Spirosoma linguale
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2705Exonuclease RNase T and DNA polymerase III (205 aa)    
Predicted Functional Partners:
Slin_6029
Nucleoside-diphosphate kinase (139 aa)
         
    0.900
Slin_4063
Pyruvate kinase (488 aa)
         
    0.900
Slin_6089
DNA polymerase III gamma/tau subunits-like protein (371 aa)
   
   
    0.826
Slin_5942
Exonuclease RNase T and DNA polymerase III (270 aa)
         
    0.800
Slin_5255
DNA polymerase III subunit epsilon (180 aa)
         
    0.800
Slin_4880
DNA polymerase III subunit beta; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (379 aa)
         
    0.800
Slin_1937
DNA polymerase III subunit delta (344 aa)
         
    0.800
Slin_0543
DNA polymerase I (1024 aa)
         
    0.800
Slin_0531
DNA polymerase III subunit alpha (1205 aa)
         
    0.800
Slin_0023
DNA polymerase III subunits gamma and tau (664 aa)
         
    0.800
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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