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Slin_2711 protein (Spirosoma linguale) - STRING interaction network
"Slin_2711" - HAD-superfamily hydrolase in Spirosoma linguale
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2711HAD-superfamily hydrolase (217 aa)    
Predicted Functional Partners:
Slin_2710
Peptidase M50 (388 aa)
              0.743
Slin_2712
Hypothetical protein (94 aa)
              0.586
Slin_2707
Hypothetical protein (478 aa)
   
        0.493
Slin_2709
ECF subfamily RNA polymerase sigma-24 subunit (196 aa)
              0.492
Slin_2708
Hypothetical protein (246 aa)
              0.492
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (439 aa)
       
      0.471
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR (195 aa)
       
      0.471
Slin_1029
Response regulator receiver sensor signal transduction histidine kinase (371 aa)
       
      0.471
Slin_2706
Hypothetical protein (928 aa)
              0.469
Slin_2714
Hypothetical protein (174 aa)
              0.423
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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