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Slin_2713 protein (Spirosoma linguale) - STRING interaction network
"Slin_2713" - Hypothetical protein in Spirosoma linguale
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slin_2713Hypothetical protein (401 aa)    
Predicted Functional Partners:
Slin_2714
Hypothetical protein (174 aa)
              0.859
Slin_1141
ATPase (366 aa)
   
          0.722
Slin_2712
Hypothetical protein (94 aa)
              0.596
Slin_4962
Hypothetical protein (398 aa)
   
          0.516
Slin_4519
Hypothetical protein (152 aa)
   
          0.516
Slin_4799
Hypothetical protein (563 aa)
   
          0.513
Slin_4961
Hypothetical protein (257 aa)
   
          0.493
Slin_2049
Hypothetical protein (455 aa)
   
          0.476
Slin_2883
Alpha amylase (630 aa)
   
          0.468
Slin_6094
Glycogen debranching protein-like protein (815 aa)
   
          0.464
Your Current Organism:
Spirosoma linguale
NCBI taxonomy Id: 504472
Other names: S. linguale, S. linguale DSM 74, Spirosoma, Spirosoma linguale, Spirosoma linguale DSM 74, Spirosoma linguale str. DSM 74, Spirosoma linguale strain DSM 74
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